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Feature/tidy

Jonathan Fisher requested to merge feature/tidy into develop

This merge request contains minor tweaks: code formatting and asthetic changes, fixes to get rid of compiler warnings, changes to make various things more C++11 idiomatic. Most changes are based on recommendations from clang-tidy.

WIP: I will go through the most important classes in nsxlib and clean/review the code. I will skip the GUI code for now since much of it needs to be refactored anyway.

Note that this branch already contains the changes from feature/valgrind, so merge request !27 (merged) should be accepted before this one.

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