Merge branch 'bugfix-inconsistent_results_when_using_multiple_atom_selections' into 'develop'

Bugfix inconsistent results when using multiple atom selections

See merge request !55

CHANGELOG

 version 1.4.0
 --------------
 * FIXED issue #51 SFFSF job was accessible from MMTK trajectory and molecular viewer
+* FIXED issue #50 Some results could be inconsistent when using multiple atom selections
 * FIXED issue #49 Some LAMMPS files could not be converted
 * FIXED issue #48 There was an error in NDTSF analysis
 * FIXED issue #47 GUI converter did not close

Src/Framework/Configurators/AtomSelectionConfigurator.py

@@ -86,7 +86,7 @@ class AtomSelectionConfigurator(IConfigurator):
         trajConfig = self._configurable[self._dependencies['trajectory']]
 
         atoms = sorted(trajConfig["universe"].atomList(), key = operator.attrgetter('index'))
-        selectedAtoms = [atoms[idx] for idx in indexes]
+        selectedAtoms = [atoms[idx] for idx in self["flatten_indexes"]]
 
         self["selection_length"] = len(self["flatten_indexes"])
         self['indexes'] = [[idx] for idx in self["flatten_indexes"]]