Commit 1d3d4bc6 authored by eric pellegrini's avatar eric pellegrini

Standardized all file headers

parent c5f9b723
Pipeline #4737 passed with stages
in 24 minutes and 20 seconds
......@@ -2,7 +2,7 @@ MDANSE project has been created by:
* Eric Pellegrini
NSXTool source code is currently developed by
MDANSE source code is currently developed by
* Eric Pellegrini
* Remi Perenon
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Extensions/distance_histogram.pyx
# @brief Implements module/class/test distance_histogram
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
import cython
cimport numpy as np
from numpy cimport ndarray
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Extensions/fast_calculation.pyx
# @brief Implements module/class/test fast_calculation
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
import cython
cimport numpy as np
from numpy cimport ndarray
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Extensions/mic_fast_calc.pyx
# @brief Implements module/class/test mic_fast_calc
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
cimport numpy as np
import numpy as np
from numpy cimport ndarray
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Extensions/mt_fast_calc.pyx
# @brief Implements module/class/test mt_fast_calc
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
import cython
cimport numpy as np
import numpy as np
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Extensions/qhull.pyx
# @brief Implements module/class/test qhull
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
#
# Copyright (C) Pauli Virtanen, 2010.
#
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Extensions/sas_fast_calc.pyx
# @brief Implements module/class/test sas_fast_calc
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
import cython
import numpy as np
cimport numpy as np
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Extensions/sd_fast_calc.pyx
# @brief Implements module/class/test sd_fast_calc
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
import cython
cimport numpy as np
import numpy as np
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Extensions/setup.py
# @brief Implements module/class/test setup
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
import glob
import os
import sys
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Extensions/xtc/trr.pyx
# @brief Implements module/class/test trr
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
# cython: c_string_type=str, c_string_encoding=ascii
##############################################################################
# MDTraj: A Python Library for Loading, Saving, and Manipulating
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Extensions/xtc/xtc.pyx
# @brief Implements module/class/test xtc
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
# cython: c_string_type=str, c_string_encoding=ascii
##############################################################################
# MDTraj: A Python Library for Loading, Saving, and Manipulating
......
#!/usr/bin/env python
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/__init__.py
# @brief Implements module/class/test __init__
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
import cPickle
import glob
import optparse
......
#!/usr/bin/env python
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/__init__.py
# @brief Implements module/class/test __init__
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
if __name__ == "__main__":
from MDANSE.GUI.Apps import ElementsDatabaseEditorApp
......
#!/usr/bin/env python
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/__init__.py
# @brief Implements module/class/test __init__
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
if __name__ == "__main__":
from MDANSE.GUI.Apps import MainApplication
......
#!/usr/bin/env python
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/__init__.py
# @brief Implements module/class/test __init__
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
if __name__ == "__main__":
from MDANSE.GUI.Apps import PeriodicTableViewerApp
......
#!/usr/bin/env python
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/__init__.py
# @brief Implements module/class/test __init__
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
if __name__ == "__main__":
from MDANSE.GUI.Apps import PlotterApp
......
#!/usr/bin/env python
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/__init__.py
# @brief Implements module/class/test __init__
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
if __name__ == "__main__":
from MDANSE.GUI.Apps import UserDefinitionViewerApp
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/Core/ClassRegistry.py
# @brief Implements module/class/test ClassRegistry
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
import glob
import imp
import inspect
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/Core/Error.py
# @brief Implements module/class/test Error
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
class Error(Exception):
'''
Base class for handling exception occurring in MDANSE.
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/Core/Platform.py
# @brief Implements module/class/test Platform
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
import abc
import ctypes
import datetime
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/Core/Singleton.py
# @brief Implements module/class/test Singleton
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
class Singleton(type):
'''
Metaclass that implements the singleton pattern.
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/Core/__init__.py
# @brief Implements module/class/test __init__
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/Data/ElementsDatabase.py
# @brief Implements module/class/test ElementsDatabase
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
import collections
import copy
import csv
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/Data/__init__.py
# @brief Implements module/class/test __init__
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/DistributedComputing/MasterSlave.py
# @brief Implements module/class/test MasterSlave
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
'''
Distributed computing using a master-slave model
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/DistributedComputing/Slave.py
# @brief Implements module/class/test Slave
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#
# **************************************************************************
import os
from MDANSE import PLATFORM
......
# **************************************************************************
#
# MDANSE: Molecular Dynamics Analysis for Neutron Scattering Experiments
#
# @file Src/DistributedComputing/__init__.py
# @brief Implements module/class/test __init__
#
# @homepage https://mdanse.org
# @license GNU General Public License v3 or higher (see LICENSE)
# @copyright Institut Laue Langevin 2013-now
# @authors Scientific Computing Group at ILL (see AUTHORS)
#